GUI Demos

The links in this section showcase TVB’s web interface.

Simulation

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Exploring a Model phase space.

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Launch a simulation.

Data Management

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View the data types in a project

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Operations executed in the project

Visualizers

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Time series view

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3D brain activity view

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Dual Brain Activity Visualizer

../_images/visualizer_tsv.jpg

Volume Visualizer

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Connectivity Matrix Editor

Python Demos

These tutorials are written as IPython Notebooks and they use the scripting interface of TVB. They can be run interactively if you have TVB’s scientific library and ipython installed.

The first set of “basic” tutorials are listed roughly in the order they should be read, and cover the basic functionality of TVB’s simulator package using very simple examples.

../_images/analyze_region_corrcoef.png

Analyze Region Corrcoef

../_images/compare_connectivity_normalization.png

Compare Connectivity Normalization

../_images/display_source_sensor_geometry.png

Display Source Sensor Geometry

../_images/exploring_longer_time_series.png

Exploring Longer Time Series

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Exploring The Bold Monitor

../_images/exploring_a_surface_mesh.png

Exploring A Surface Mesh

../_images/generate_surrogate_connectivity.png

Generate Surrogate Connectivity

../_images/integrators.png

Integrators Presentation

../_images/integrators.png

Integrators Comparison

../_images/interact_client_api_simulation.png

Generate a new model using DSL

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Simulate Bold Continuation

../_images/simulate_reduced_wong_wang.png

Simulate Reduced Wong Wang

../_images/simulate_region_bold_stimulus.png

Simulate Region Bold Stimulus

../_images/simulate_region_jansen_rit.png

Simulate Region Jansen Rit

../_images/simulate_region_stimulus.png

Simulate Region Stimulus

../_images/simulate_surface_seeg_eeg_meg.png

Simulate Surface Seeg Eeg Meg

../_images/using_your_own_connectivity.png

Using Your Own Connectivity

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Applying multiple Stimuli

../_images/epileptic_signal.png

Exploring Epileptor 2D

../_images/epileptic_signal.png

Exploring Resting State in Epilepsy

../_images/epileptic_signal.png

Exploring the Epileptor 3D

../_images/epileptic_signal.png

Simulate SEEG for Epileptor with Observation Noise

Interact with TVB Framework

../_images/interacting_with_the_framework.png

Interacting With The Framework

../_images/interacting_with_the_framework.png

Generate TimeSeries for import in Web GUI

../_images/interacting_with_the_framework.png

Encrypt Files before upload in TVB Web GUI

../_images/interacting_with_the_framework.png

Launch BIDS derivatives importer

../_images/interacting_with_the_framework.png

Integrating with SIIBRA

Interact with TVB REST Client API

../_images/interact_client_api_simulation.png

Interacting with TVBClient API by launching simulation and analyzer methods

../_images/interact_client_api_operation.png

Interacting with TVBClient API importers

Mouse

../_images/interacting_with_the_framework.png

Interacting With The Framework and Allen

../_images/simulate_for_mouse.png

Simulate for Mouse

MATLAB Demos

These are the first demos of the experimental use of TVB from the MATLAB environment, and they will be expanded in the future.

../_images/tvb_demo_region_rww_01.png

Reduced Wong-Wang model

../_images/tvb_demo_two_epi_01.png

Two Epileptor simulation