Source code for tvb.adapters.datatypes.h5.temporal_correlations_h5

# -*- coding: utf-8 -*-
#
#
# TheVirtualBrain-Framework Package. This package holds all Data Management, and
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# (c) 2012-2023, Baycrest Centre for Geriatric Care ("Baycrest") and others
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# This program is free software: you can redistribute it and/or modify it under the
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from tvb.adapters.datatypes.h5.spectral_h5 import DataTypeMatrixH5
from tvb.core.neotraits.h5 import DataSet, Reference, Json
from tvb.datatypes.temporal_correlations import CrossCorrelation




class CrossCorrelationH5(DataTypeMatrixH5):

    def __init__(self, path):
        super(CrossCorrelationH5, self).__init__(path)
        self.array_data = DataSet(CrossCorrelation.array_data, self, expand_dimension=3)
        self.source = Reference(CrossCorrelation.source, self)
        self.time = DataSet(CrossCorrelation.time, self)
        self.labels_ordering = Json(CrossCorrelation.labels_ordering, self)



    def read_data_shape(self):
        """
        The shape of the data
        """
        return self.array_data.shape




    def read_data_slice(self, data_slice):
        """
        Expose chunked-data access.
        """
        return self.array_data[data_slice]




    def write_data_slice(self, partial_result):
        """
        Append chunk.
        """
        self.array_data.append(partial_result.array_data, close_file=False)