portlets Package

portlet_configurer

class tvb.core.portlets.portlet_configurer.PortletConfigurer(portlet_entity)

Bases: object

Helper class that handles all the functionality required from a portlet. Given a portlet entity, this will allow the following:

• return a configurable interface in the form of a dictionary

  equivalent to the input tree of an adapter

• create a new PortletConfiguration entity, or update a already

  created one with a new set of parameters

algo_identifier

Unique identifier for current portlet.

static build_adapter_from_declaration(adapter_declaration)

Build and adapter from the declaration in the portlets xml.

static clear_data_for_portlet(stored_portlet)

Remove any reference towards a given portlet already selected in a BurstConfiguration.

create_new_portlet_configuration(name='')

Create a PortletConfiguration entity with the default values from the portlet XML declaration and the adapter input trees.

get_configurable_interface()

Given an algorithm identifier, go trough the adapter chain, and merge their input tree with the declared overwrites

log = <logging.Logger object at 0x7f372a0d4290>

portlet_id

Portlet DB identifier

prefix_adapters_parameters(adapter_config_list)

Prepend separate prefix to the name of each entry of the adapter interfaces.

Parameters:adapter_config_list – a list of AdapterConfiguration entities. Returns:same list with the difference that a separate prefix is prepended to the name of each parameter from the adapter interface, specific to the step it is in the adapter chain.

ui_name

Portlet name to be displayed in UI

static update_default_values(portlet_interface, portlet_configuration)

Parameters:

• portlet_interface – a list of AdapterConfiguration entities.
• portlet_configuration – a PortletConfiguration entity.

Update the defaults from each AdapterConfiguration entity with the values stored in the corresponding workflow step held in the PortletConfiguration entity.

static update_portlet_configuration(portlet_configuration, submited_parameters)

Parameters:

• portlet_configuration – the portlet configuration that need to be updated
• submited_parameters – a list of parameters as submitted from the UI. This All names are prefixed with adapter specific generated prefix.

xml_reader

class tvb.core.portlets.xml_reader.PortletWrapper

Bases: object

Transient model class, used for passing data when reading from XML into portlets memory

get_inputs_dict()

Return only inputs dictionary

to_dict()

Convert into the expected UI tree

class tvb.core.portlets.xml_reader.XMLPortletReader(interface_file)

Bases: object

Helper class to read from XML, a group of Portlets definition.

get_adapters_chain(algorithm_identifier)

Return the list of outputs for a given algorithm

get_algorithms_dictionary()

Retrieve the dictionary of available sub-Algorithm references.

get_inputs(algorithm_identifier)

Return the interface Tree for a single sub-algorithm

logger = <logging.Logger object at 0x7f37474d5710>