.. _benchmark_tvb_154: ********************** Benchmarks - TVB 1.5.4 ********************** +------------+-----------------------------------------------------------------+ | System Info | +============+=================================================================+ |OS | OS X Sierra 10.12.6 | +------------+-----------------------------------------------------------------+ |Memory | 16GB DDR3 @1600MHz   | +------------+-----------------------------------------------------------------+ |Processor | 4 x 2.5 GHz Intel Core i7 | +------------+-----------------------------------------------------------------+ |TVB version | 1.5.4 #8430 - Mac x64 | +------------+-----------------------------------------------------------------+ A standardized set of benchmarks follows. All unspecified parameters have the default values. For parameters that influence running times significantly at least two values were used. The local model parameters are usually irrelevant for the purpose of benchmarking. +--------------------+------------------------------------+ | Case A | +====================+====================================+ |Model | Generic2dOscillator (numba dfun) | +--------------------+------------------------------------+ |Coupling | Linear | +--------------------+------------------------------------+ |Dimension | 2 state variables | +--------------------+------------------------------------+ |Integration method | HeunDeterministic | +--------------------+------------------------------------+ |Simulation Length | 1000 ms | +--------------------+------------------------------------+ +------------------------+--------+-------+-----------+---------+-----------+ | Results | +------------------------+--------+-------+-----------+---------+-----------+ | Model | Sim. | Nodes |Conduction | time | Execution | | | Length | |speed | step | time | +------------------------+--------+-------+-----------+---------+-----------+ | | (ms)| | (mm/ms)| (ms)| min:sec | +========================+========+=======+===========+=========+===========+ | Generic2dOscillator | 1000 | 68 | 30.0 | 0.1 | 00:03.3 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 68 | 3.0 | 0.1 | 00:03.3 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 68 | 30.0 | 0.05 | 00:06.1 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 68 | 3.0 | 0.05 | 00:05.5 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 96 | 30.0 | 0.1 | 00:03.5 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 96 | 3.0 | 0.1 | 00:03.6 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 96 | 30.0 | 0.05 | 00:07.1 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 96 | 3.0 | 0.05 | 00:07.0 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 192 | 30.0 | 0.1 | 00:04.0 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 192 | 3.0 | 0.1 | 00:04.4 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 192 | 30.0 | 0.05 | 00:07.6 | +------------------------+--------+-------+-----------+---------+-----------+ | Generic2dOscillator | 1000 | 192 | 3.0 | 0.05 | 00:07.2 | +------------------------+--------+-------+-----------+---------+-----------+ +--------------------+------------------------------------+ | Case B | +====================+====================================+ |Model | Epileptor (numba dfun) | +--------------------+------------------------------------+ |Coupling | Linear | +--------------------+------------------------------------+ |Dimension | 6 state variables | +--------------------+------------------------------------+ |Integration method | HeunDeterministic | +--------------------+------------------------------------+ |Simulation Length | 1000 ms | +--------------------+------------------------------------+ +------------------------+--------+-------+-----------+---------+-----------+ | Results | +------------------------+--------+-------+-----------+---------+-----------+ | Model | Sim. | Nodes |Conduction | time | Execution | | | Length | |speed | step | time | +------------------------+--------+-------+-----------+---------+-----------+ | | (ms)| | (mm/ms)| (ms)| min:sec | +========================+========+=======+===========+=========+===========+ | Epileptor | 1000 | 68 | 30.0 | 0.1 | 00:04.0 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 68 | 3.0 | 0.1 | 00:04.4 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 68 | 30.0 | 0.05 | 00:07.4 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 68 | 3.0 | 0.05 | 00:06.5 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 96 | 30.0 | 0.1 | 00:05.0 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 96 | 3.0 | 0.1 | 00:04.5 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 96 | 30.0 | 0.05 | 00:08.7 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 96 | 3.0 | 0.05 | 00:08.9 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 192 | 30.0 | 0.1 | 00:05.1 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 192 | 3.0 | 0.1 | 00:05.1 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 192 | 30.0 | 0.05 | 00:08.9 | +------------------------+--------+-------+-----------+---------+-----------+ | Epileptor | 1000 | 192 | 3.0 | 0.05 | 00:08.8 | +------------------------+--------+-------+-----------+---------+-----------+ +--------------------+------------------------------------+ | Case C | +====================+====================================+ |Model | LarterBreakspear | +--------------------+------------------------------------+ |Coupling | HyperbolicTangent | +--------------------+------------------------------------+ |Dimension | 3 state variables | +--------------------+------------------------------------+ |Integration method | HeunDeterministic | +--------------------+------------------------------------+ |Simulation Length | 10 sec | +--------------------+------------------------------------+ |Conduction speed | 10 mm/ms | +--------------------+------------------------------------+ +------------------------+--------+-------+-----------+---------+-----------+ | Results | +------------------------+--------+-------+-----------+---------+-----------+ | Model | Sim. | Nodes |Conduction | time | Execution | | | Length | |speed | step | time | +------------------------+--------+-------+-----------+---------+-----------+ | | (ms)| | (mm/ms)| (ms)| min:sec | +========================+========+=======+===========+=========+===========+ | LarterBreakspear | 10000 | 68 | 10.0 | 0.2 | 00:33.6 | +------------------------+--------+-------+-----------+---------+-----------+ | LarterBreakspear | 10000 | 68 | 10.0 | 0.1 | 01:03.1 | +------------------------+--------+-------+-----------+---------+-----------+ | LarterBreakspear | 10000 | 96 | 10.0 | 0.2 | 00:39.4 | +------------------------+--------+-------+-----------+---------+-----------+ | LarterBreakspear | 10000 | 96 | 10.0 | 0.1 | 01:14.6 | +------------------------+--------+-------+-----------+---------+-----------+ | LarterBreakspear | 10000 | 192 | 10.0 | 0.2 | 00:52.8 | +------------------------+--------+-------+-----------+---------+-----------+ | LarterBreakspear | 10000 | 192 | 10.0 | 0.1 | 01:19.2 | +------------------------+--------+-------+-----------+---------+-----------+